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Pharmacogenetic Testing

Pharmacogenetics (PGx), an important part of precision medicine, is the study of how genetic variability influences drug treatment outcomes. Recommended by Guidelines, many medications currently prescribed have pharmacogenetic data to support appropriate dosing or selection. Like all diagnostic tests, pharmacotherapeutic genotyping is one of multiple pieces of information that clinicians should consider when making their therapeutic choice for each patient.

Clinical Labs offers a comprehensive range of pharmacogenetic testing in order to provide Clinicians and healthcare providers with important information to help decide on the most appropriate treatment for each individual, particularly in areas such as mental health, pain management, cardiology and oncology.



"The field of pharmacogenetics
involves using a patient’s genetic makeup in combination with other clinical information to create a personalised medication regimen with greater efficacy and safety for the individual patient."





Pharmacogenetic (PGx) test list at Australian Clinical Labs


Our comprehensive pharmacogenetic tests can detect polymorphisms in genes coding for drug metabolising enzymes that predispose individuals to metabolising drugs inadequately.

Gene panels offered:
Cytochrome P450 Comprehensive Gene Panel including*:
CYP2D6, CYP2C9, CYP2C19, CYP3A4, CYP3A5, CYP1A2, SLCO1B1 and VKORC1

Single gene tests:
TPMT (Medicare rebate)
DPYD
UGT1A1
• CYP2D6
• CYPC9
• CY2C19


*Please note that the panel Cytochrome P450 Genes can be ordered separately or together (CYP2D6, CYP2C9, CYP2C19, CYP3A4, CYP3A5, CYP1A2, SLCO1B1 and VKORC1).

To access Assoc. Prof. Mirette Saad's clinical article on Pharmacogenetic Testing from the December 2021 edition of Pathology Focus, CLICK HERE

For a full listing of genes tested and drugs metabolised, see the table below. 
Please note that this is a guide for gene selection. Some specific medications may not be reported if they are listed under a drug class that is metabolised by the relevant gene. 

Selection guide of genes tested based on medications of use

 GENE Type of Metabolised Medication Metabolised DRUG Medicare Rebate

CYP2D6

  • Anti-Psychotics
  • Anti-Depressants 
  • Pain Management
  • Oncology
  • Cardiology
  • Neurology
  • Urology
  • Others

Anti-Psychotics 
Aripiprazole
Brexpiprazole
Chlorpromazine
Haloperidol
Risperidone
Zuclopenthixol

SSRI
Citalopram
Escitalopram
Paroxetine
Sertraline

TCAs
Amitriptyline
Clomipramine
Desipramine
Doxepin
Imipramine
Nortriptyline
Trimipramine

Oncology
Gefitinib
Tamoxifen

Cardiology
Carvedilol
Flecainide
Metoprolol

Opioids and Pain Management
Codeine (prodrug)
Dihydrocodeine
Morphine
Naltrexone
Oxycodone
Tramadol

Neurology, Anti-ADHD
and Anti-Dementia
Atomoxetine
Dextroamphetamine
Donepezil
Galantamine Lisdexamfetamine

Urology Medication
Darifenacin
Mirabegron
Tamsulosin
Tolterodine

Others
Metoclopramide
Ondansetron
 N/A
 CYP2C9  
  • Pain Management
  • Anti-Coagulant
        (Warfarin) 
NSAIDs
Celecoxib
Flurbiprofen
Ibuprofen
Meloxicam
Piroxicam
Neurology
Phenytoin

Anti-Coagulant
Warfarin
 N/A
CYP2C19
  • PPIs
  • Anti-Platelets
        (Clopidogrel)
  • Anti-Depressants
  • Neurology

PPIs:
Esomeprazole (Nexium)
Lansoprazole
Omeprazole (Losec)
Pantoprazole
Rabeprazole

Anti-Platelets
Clopidogrel

SSRI
Citalopram
Escitalopram
Fluoxetine (Prozac)
Fluvoxamine
Paroxetine
Sertraline (Zoloft)

Anti-Psychotics
Clozapine

TCAs
Amitriptyline
Clomipramine
Desipramine
Doxepin
Imipramine
Nortriptyline
Trimipramine

Benzodiazepines (Anxiolytics)
Clobazam
Diazepam (Valium)

MAOIs
Moclobemide

Neurology
Phenytoin

N/A
SLCO1B1
  • Lipid Lowering
        Medications
        (Cardiology)
Pravastatin
Simvastatin
  N/A
CYP1A2
  • Anti-Psychotics
  • Anti-Depressants
Clozapine
Duloxetine
Olanzapine

 

N/A

CYP3A4
  • Psychiatric
        Medications
  • Statins
  • Organ Transplant
  • Pain Management
  • Others
Atorvastatin
Codeine
Diazepam
Quetiapine
Simvastatin
Tacrolimus
  N/A
CYP3A5 
(and CYP3A4)
  • Organ Transplant
Tacrolimus   N/A
VKORC1
  • Anti-Coagulant
Warfarin   N/A
TPMT
  • Oncology
Azathioprine
Cisplatin
Mercaptopurine
Thioguanine
  YES
DPYD
  • Oncology

Capecitabine
5-Fluorouracil
Tegafur

  N/A
UGTA1
  • Oncology


Atazanavir
Belinostat
Binimetinib
Irinotecan
Nilotinib
Pazopanib

  N/A

 Content in above Table is correct as of 16.05.23. 

When to order: Before commencing therapy, with adverse reaction or resistance.

How to order:
Fill out our routine Clinical Labs testing request form, list the gene required or group of genes and prescribed medications if available.

Turanaround time:
Results will be available after 7-10 business days from the sample receipt date.

Specimen required:
2x EDTA blood samples.

Report: 
With the Cytochrome P450 Comprehensive Gene Panel you will receive a comprehensive report* that will indicate the genotype and the predicted phenotypes, such as the metaboliser status along with potential drug-gene interaction and guidelines’ recommendations. Please specify any medications of interest if you want them to be included in the report. For individual genes, only genotyping/phenotyping will be reported. 
*Comprehensive report is issued in collaboration with MyDNA.

Test cost: 

Cytochrome P450 Comprehensive Gene Panel (including CYP2D6, CYP2C9, CYP2C19, CYP3A4, CYP3A5, CYP1A2, SLCO1B1 and VKORC1): No Medicare rebate available. An out-of-pocket fee of $190 applies.
Note: If any of the genes from the Cytochrome P450 Comprehensive Gene Panel are ordered individually, an out-of-pocket fee of $140 applies, for each gene ordered.
TPMT: 
Medicare rebate available.
DPYD: 
No Medicare rebate available. An out-of-pocket fee of $140 applies.
UGT1A1: 
No Medicare rebate available. An out-of-pocket fee of $195 for UG1 test and $95 for GIL test applies.
Analgesic Dosing (CYP2D6)
:
No Medicare rebate available. An out-of-pocket fee of $140 applies.
Clopidogrel Predictor (CYP2C19):
No Medicare rebate available. An out-of-pocket fee of $140 applies.
Tamoxifen Predictor (CYP2D6):
No Medicare rebate available. An out-of-pocket fee of $140 applies.
Warfarin Predictor (CYP2C9/VKORC1):
No Medicare rebate available. An out-of-pocket fee of $150 applies.
Variconazole (CYP2C19):
No Medicare rebate available. An out-of-pocket fee of $140 applies.
Proton Pump Inhibitors (CYP2C19):
No Medicare rebate available. An out-of-pocket fee of $140 applies.

 

About Associate Professor Mirette Saad

Assoc. Prof. Mirette Saad
National Director of Molecular Genetics Australian Clinical Labs

MBBS (HONS), MD (HONS), MAACB, FRCPA, PHD
Lab: Clayton
Speciality: Chemical Pathology
Areas of interest: Molecular genetics, precision medicine, cancer genetics, antenatal screening, NIPT, endocrine,
fertility testing and research, medical teaching

Phone: (03) 9538 6777
Email: mirette.saad@clinicallabs.com.au

Associate Professor Mirette Saad is a Consultant Chemical Pathologist and the National Director of Molecular Genetics at Australian Clinical Labs. She has a Fellowship with honours in Chemical and Molecular Pathology, with Microbiology sub-speciality, from Suez Canal University, Egypt. A/P Saad received her NHMRC sponsored PhD degree in Cancer Genetics from Melbourne University and Peter MacCallum Cancer Institute. Along with her teaching and research roles, A/P Saad is a registered medical practitioner with AHPRA, a Chemical Pathology Fellow (FRCPA) at the Royal College of Pathologists of Australasia and a Member of the Australasian Association of Clinical Biochemists (MAACB). She is a Chair of the RCPA Chemical Pathology Advisory Committee, Member of the RCPA Genetic Advisory Committee, AACB and a Chair of the Precision Medicine Services at Australian Clinical Labs. At Clinical Labs, A/Prof Mirette Saad leads the Molecular Genetic testing for non-invasive prenatal testing (NIPT), antenatal screening, personalised drug therapy and cancer.